Nextflow workflow report

[irreverent_noyce] (resumed run)

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: null.

The full error message was:

Error executing process > 'sourmash_compare_sketches (fromcsvs_molecule-protein_ksize-9_log2sketchsize-16)'

Caused by:
  olgabot-maca.s3.us-west-2.amazonaws.com
Run times
Thu Mar 14 08:11:21 PDT 2019 - Thu Mar 14 08:16:08 PDT 2019 (duration: 4m 47s)
  0 succeeded  
  2027 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run ../main.nf --samples ../samples.csv --log2_sketch_size 16 --ksize 9 --molecule protein --outdir 's3://olgabot-maca/nf-kmer-similarity/human_mouse_zebrafish/' -work-dir 's3://olgabot-maca/nextflow-workdir-test/' -bucket-dir 's3://olgabot-maca/nextflow-bucket-dir-test/' -with-trace -with-timeline -with-dag -with-report -latest -resume
CPU-Hours
120.8 (100% cached)
Launch directory
/Users/olgabot/code/nf-kmer-similarity/from-csvs/ksize9_log2sketchsize16
Work directory
s3://olgabot-maca/nextflow-workdir-test
Project directory
/Users/olgabot/code/nf-kmer-similarity/from-csvs
Script name
main.nf
Script ID
8aa6226f687eaa814670ba18f5f1f142
Workflow session
197d650a-6d7a-4ed8-b472-a64fac938a3d
Workflow profile
standard
Nextflow version
version 19.01.0, build 5050 (22-01-2019 11:19 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU Usage

Memory Usage

Job Duration

Disk I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)